BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A02LP1|AL430632
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1490 0.0
3x_Contig805 229 8e-60
>3x_Contig1653
Length = 14012
Score = 1490 bits (748), Expect = 0.0
Identities = 764/774 (98%)
Strand = Plus / Minus
Query: 179 agtagaaacttttgtatatatgtgtttcgtactttcctaattttacttttttaatgcatc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14012 agtagaaacttttgtatatatgtgtttcgtactttcctaattttacttttttaatgcatc 13953
Query: 239 aagtcatttgaacaatcaaagtcaatagaaactctattatcattaamaattcgcattttt 298
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 13952 aagtcatttgaacaatcaaagtcaatagaaactctattatcattaaaaattcgcattttt 13893
Query: 299 ccaaatacaacaattcaacagagtatgactgtttaacatcaggatgagatgtgagtcaga 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13892 ccaaatacaacaattcaacagagtatgactgtttaacatcaggatgagatgtgagttaga 13833
Query: 359 ataamactacttgagtgtctgttttatgccattacaatatagctgaagacaccagtaaaa 418
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13832 ataaaactacttgagtgtctgttttatgccattacaatatagctgaagacaccagtaaaa 13773
Query: 419 gataataggaagcmactagaaatcaaactagcaaatmataaagtgcccaatagatgacaa 478
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13772 gataataggaagcaactagaaatcaaactagcaaataataaagtgcccaatagatgacaa 13713
Query: 479 gttcttctccagcttagtaaaaactttcggaatccggtatatttcactgamaattggaca 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13712 gttcttctccagcttagtaaaaactttcggaatccggtatatttcactgaaaattggaca 13653
Query: 539 ttgatgtaacttaamaggtagtcctcagtatagtcctttaaatctatcctgatcctcttg 598
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13652 ttgatgtaacttaaaaggtagtcctcagtatagtcctttaaatctatcctgatcctcttg 13593
Query: 599 ttatcaggatttacaggaaatccaaacttaaagtcattgatgacatctttcttgacagtt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13592 ttatcaggatttacaggaaatccaaacttaaagtcattgatgacatctttcttgacagtt 13533
Query: 659 tttgacactgaatcgaacccattgaatcttgaagagagacaattcaagttatcaaaacat 718
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 13532 tttgacactgaatcgaacccattgaatcttgaagagagaaaattcaagttatcaaaacat 13473
Query: 719 acaagaggtaactttctgggattgtcatctattgataaagtcacggcctcaattggtcgg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13472 acaagaggtaactttctgggattgtcatctattgataaagtcacggcctcaattggtcgg 13413
Query: 779 tgagaagtacaataaatccccaaatttaaggtaacatctaaaggtatgtctgatcgtatt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13412 tgagaagtacaataaatccccaaatttaaggtaacatctaaaggtatgtctgatcgtatt 13353
Query: 839 tcattctctttagttgatgtaacattggcaatgacccgcaaatcaaatggaactgtccaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13352 tcattctctttagttgatgtaacattggcaatgacccgcaaatcaaatggaactgtccaa 13293
Query: 899 gaattagccatgttgctcaaaggtataacatgcattctgttgtttgggawcaac 952
||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 13292 gaattagccatgttgctcaaaggtataacatgcattctgttgtttggaatcaac 13239
>3x_Contig805
Length = 3584
Score = 229 bits (115), Expect = 8e-60
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 aaattgatcactagactgaccaagttgataaaagtaatatacactttcaatcttactatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470 aaattgatcactagactgaccaagttgataaaagtaatatacactttcaatcttactatg 3529
Query: 61 aaggaatttgtcgagtttgagaaggttaacggaaacaaccttatttacatggagt 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 aaggaatttgtcgagtttgagaaggttaacggaaacaaccttatttacatggagt 3584
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7729
Number of Sequences: 1807
Number of extensions: 7729
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)